Endophytic bacteria associated with rice roots from suboptimal land as plant growth promoters
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Abstract. Prihatiningsih N, Djatmiko HA, Lestari P. 2021. Endophytic bacteria associated with rice roots from suboptimal land as plant growth promoters. Biodiversitas 22: 432-437. Endophytic bacteria directly promoted plant growth and undirectly control the pathogens. This research was aimed to evaluate endophytic bacteria associated with rice root and their activity to promote plant growth and to control rice diseases. The study was conducted at the Laboratorium of Plant Protection and experimental farm Faculty of Agriculture Jenderal Soedirman University, from April to August 2020. The endophytic bacterial from suboptimal land were evaluated for promoting plant growth with soaking seed before seedling and spraying them at 10, 20, and 30 days after transplanting. The experiment was arranged with six replications and four treatments namely control (untreated endophytic bacteria) SM1 (endophytic bacteria isolate from Somagede); SB1 and SB3 (from Sumbang). Xanthomonas oyzae pv. oryzae was nature inoculation because the experiment location is in the endemic category of bacterial leaf blight. The variables observed were the plant growth components i.e plant height, number of tillers, number of panicles, incubation period, disease intensity, infection rate and effectiveness control. The result of this research shows that endophytic bacteria from Somagede (SM1) is the best to enhance plant height and number of tillers, and suppress disease intensity, and delay of incubation period.
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References
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Christina A, Christapher V, & Bhore SJ. 2013. Endophytic bacteria as a source of novel antibiotics: an overview. Pharmacogn Rev 7:11–16
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Ryan RP, Germaine K, Franks A, Ryan DJ, Dowling DN. 2008. Bacterial endophytes: recent developments and applications. FEMS Microbiol Lett 278:1–9
Sarra S, Diarra L, Dembele M, Coulibaly MM, and Sese Y. 2010. Characterization of bacterial leaf blight epidemic in the Office du Niger (Mali) and search for a sustainable resistance against the pathogen. Second Africa Rice Congres, Bamako Mali; Innovation and Partnerships to Realize Africa’s Rice Potential
Singh AK, Sarma Bk, Singh PK, and Nandan R. 2013. Screening of Rice (Oryza sativa L) germplasm against Xanthomnas oryzae pv oryzae J. Eco-friendly Agriculture 8(1): 86-88
Sirappa MP and Titahena MLJ. 2014. Improvement of Suboptimal Land Productivity Approach by Land and Plant Management. J Trop Soils. 19(2): 1-11
Ulloa-Ogaz AL, Muñoz-Castellanos LN and Nevárez-Moorillón GV. 2015. Biocontrol of phytopathogens: Antibiotic production as mechanism of control. Formatex 2015: 305-309
van der Plank, JE. 1963. Plant Disease: Epidemic and Control. Academic Press, New York
Wang M, Xing Y, Wang J, Xu Y, Wang G. 2014. The role of the chi1 gene from the endophytic bacteria Serratia proteamaculans 336x in the biological control of wheat take-all. Can J Microbiol 60:533–540
Yasmin, F., R. Othman, S. Kamaruzaman & M.S. Saad. 2009. Characterization of beneficial properties of plant growth-promoting rhizobacteria isolated from sweet potato rhizosphere. African Journal of Microbiology Research 3(11): 815-821
Yousefi H, Hassanzadeh N, Behboudi K and Beiki Firouzjahi F. 2018. Identification and determination of characteristics of endophytes from rice plants and their role in biocontrol of bacterial blight caused by Xanthomonas oryzae pv. oryzae. Hellenic Plant Protection Journal 11: 19-33
Berg G. Krechel A, Ditz M, Sikora RA, Ulrich A, Hallmann J. 2005. Endophytic and ectophytic potato-associated bacterial communities differ in structure and antagonistic function against plant pathogenic fungi. FEMS Microbiol Ecol 51:215–229
Christina A, Christapher V, & Bhore SJ. 2013. Endophytic bacteria as a source of novel antibiotics: an overview. Pharmacogn Rev 7:11–16
Dawwam GE, Elbeltagy A, Emara HM, Abbas IH & Hassan MM. 2013. Beneficial effect of plant growth promoting bacteria isolated from the roots of potato plant. Annals of Agricultural Science 58: 195-201
Djatmiko HA, Prakoso B, Prihatiningsih N. 2011. Penentuan Patotipe dan keragaman genetik Xanthomonas oryzae pv. oryzae pada tanaman padi di wilayah karesidenan Banyumas. JHPT.Tropika 11(1): 35-46 .
Djatmiko HA, Prihatiningsih N, dan Ismangil. 2017. Pupuk Organik diperkaya Bacillus subtilis B1. Paten sederhana dengan nomor pendaftaran paten S00201707795
Furutani, A., Takaoka, M., Sanada, H., Noguchi, Y., Oku, T., Tsuno, K., Ochiai, H., and Tsuge, S. 2009. Identification of novel type III secretion effectors in Xanthomonas oryzae pv. oryzae. Molecular Plant-Microbe Interaction 22(1): 96-106
Glick BR, 2012. Plant growth-promoting bacteria: mechanism and applications. Scientifica. 2010.15 p
Gordon, R.E., W.C. Hayes & C.H.N. Pang. 1973. The Genus Bacillus. Agriculture Research Service, United States Departement of Agriculture, Washington
Hamilton CE, Gundel PE, Helander M, & Saikkonen K. 2012. Endophytic mediation of reactive oxygen species and antioxidant activity in plants: a review. Fungal Div 54:1–10
Hu, Q-P & J-G Xu. 2011. A Simple double-layered chrome azulor S agar (SD-CASA) plate assay to optimize the production of siderophores by a potential biocontrol agent Bacillus. African Journal of Microbiology Research 5(25): 4321-4327
Kesaulya H, Baharuddin, Zakaria B, Syatrianty A, & Syaiful. 2015. Isolation and Physiological Characterization of PGPR from Potato Plant Rhizosphere in Medium Land of Buru Islan. Procedia Food Science 3: 190 – 199
Khan AA, Jilani G, Akhtar MS, Naqvi SMS and Rasheed. 2009. Phosphorus Solubilizing Bacteria: Occurrence, Mechanisms and their Role in Crop Production. J. AGRIC. BIOL. SCI. 1(1):48-58
Lestari P, Prihatiningsih N, and Djatmiko, HA. 2017. Partial biochemical characterization of crude extract extracellular chitinase enzyme from Bacillus subtilis B298. IOP Conf.Series: Materials Science and Enginieering 172 (2017)012041
Mohite B, 2013. Isolation and characterization of indole acetic acid (IAA) producing bacteria from rhizospheric soil and its effect on plant growth. Journal of Soil Science and Plant Nutrition 13(3): 638-649
Muthukumar A, R. Udhayakumar and R. Naveenkumar. 2017. Role of Bacterial Endophytes in Plant Disease Control. In. D.K. Maheshwari and K. Annapurna (eds.), Endophytes: Crop Productivity and Protection, Sustainable Development and Biodiversity 16. Springer International Publishing AG 2017
Nagendran K, Karthikeyan G, Peeran MF, Raveendran M, Prabakar K and Raguchander T. 2013. Management of Bacterial Leaf Blight Disease in Rice with Endophytic Bacteria. World Applied Sciences Journal 28 (12): 2229-2241
Olanrewaju OS, Glick BR, Babalola OO. 2017. Mechanisms of action of plant growth promoting bacteria. World J Microbiol Biotechnol 33: 197
Pieterse CM, Zamioudis C, Berendsen RL, Weller DM, Van Wees SC, Bakker PA. 2014. Induced systemic resistance by beneficial microbes. Annu Rev Phytopathol 52:347–375
Prihatiningsih N, Djatmiko HA & Lestari P. 2017. Aktivitas Siderofor Bacillus subtilis sebagai Pemacu Pertumbuhan dan Pengendali Patogen Tanaman Terung. Jurnal HPT Tropika 17 (2): 170 – 178
Prihatiningsih N, Djatmiko HA, Lestari P. 2020. Screening of competent rice root endophytic bacteria to promote rice growth and bacterial leaf blight disease control. Jurnal Hama dan Penyakit Tumbuhan Tropika 20(1): 78-84
Reetha AK, Pavani SL, and.Mohan S. 2014. Hydrogen Cyanide Production Ability by bacterial antagonist and their Antibiotics Inhibition Potential on Macrophomina phaseolina (Tassi.) Goid. Int.J.Curr.Microbiol.App.Sci.(2014)3(5): 172-178
Ryan RP, Germaine K, Franks A, Ryan DJ, Dowling DN. 2008. Bacterial endophytes: recent developments and applications. FEMS Microbiol Lett 278:1–9
Sarra S, Diarra L, Dembele M, Coulibaly MM, and Sese Y. 2010. Characterization of bacterial leaf blight epidemic in the Office du Niger (Mali) and search for a sustainable resistance against the pathogen. Second Africa Rice Congres, Bamako Mali; Innovation and Partnerships to Realize Africa’s Rice Potential
Singh AK, Sarma Bk, Singh PK, and Nandan R. 2013. Screening of Rice (Oryza sativa L) germplasm against Xanthomnas oryzae pv oryzae J. Eco-friendly Agriculture 8(1): 86-88
Sirappa MP and Titahena MLJ. 2014. Improvement of Suboptimal Land Productivity Approach by Land and Plant Management. J Trop Soils. 19(2): 1-11
Ulloa-Ogaz AL, Muñoz-Castellanos LN and Nevárez-Moorillón GV. 2015. Biocontrol of phytopathogens: Antibiotic production as mechanism of control. Formatex 2015: 305-309
van der Plank, JE. 1963. Plant Disease: Epidemic and Control. Academic Press, New York
Wang M, Xing Y, Wang J, Xu Y, Wang G. 2014. The role of the chi1 gene from the endophytic bacteria Serratia proteamaculans 336x in the biological control of wheat take-all. Can J Microbiol 60:533–540
Yasmin, F., R. Othman, S. Kamaruzaman & M.S. Saad. 2009. Characterization of beneficial properties of plant growth-promoting rhizobacteria isolated from sweet potato rhizosphere. African Journal of Microbiology Research 3(11): 815-821
Yousefi H, Hassanzadeh N, Behboudi K and Beiki Firouzjahi F. 2018. Identification and determination of characteristics of endophytes from rice plants and their role in biocontrol of bacterial blight caused by Xanthomonas oryzae pv. oryzae. Hellenic Plant Protection Journal 11: 19-33
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