Screening of endophytic fungi from oil palm (Elaeis guineensis) in producing exopolysaccharides

##plugins.themes.bootstrap3.article.main##

YURNALIZA YURNALIZA
IT JAMILAH
ADRIAN HARTANTO
ANISA LUTVIA

Abstract

Abstract. Yurnaliza Y, Jamilah I, Hartanto A, Lutfia A. 2021. Screening of endophytic fungi from oil palm (Elaeis guineensis) in producing exopolysaccharides. Biodiversitas 22: 1467-1473. Exopolysaccharides (EPS) are microbial polysaccharides with a high biotechnological application in many fields due to their bioactivity and biocompatibility. Endophytic fungi are potential agents for producing EPS even though they remained under-exploited, especially those originating as indigenous strains from oil palm (Elaeis guineensis Jacq.). The present study reports on EPS production by a collection of endophytic fungi isolated from the petioles of oil palm under submerged fermentation. The culture medium was formulated with sucrose as C-source to trigger the secretion of EPS by the strains. Isolation of EPS was done through absolute ethanol precipitation in cold conditions. A total of 29 endophytic fungal strains was recovered from the foliar part of the plants. Molecular identification based on ITS-rDNA region and phylogenetic construction of each lineage revealed the dominant species from Pestalotiopsidaceae (syn. Amphisphaeriaceae), followed by Hypoxylaceae, Pleosporaceae, Didymosphaeriaceae, Sporocadaceae, and other minor families. In general, most isolates were ascomycetous fungi along with a basidiomycetous and zygomycetous fungus. After fermentation for 10 days, three fungal endophytes identified as Annulohypoxylon thailandicum P8 (Hypoxylaceae), Pseudopestalotiopsis simitheae P1 (Pestalotiopsidaceae), and Diaporthe eucalyptorum P11 (Diaporthaceae) secreted EPS higher in values than the others. The most prominent strain was A. thailandicum P8 with a yield of >50 mg/100 mL of filtrate solution. Based on FT-IR spectral analysis, the EPS product was detected to contain carboxyl, carbonyl, glycosidic bonds, and hydroxyl groups hereafter confirmed the characteristics of exopolysaccharides. The results demonstrated that the EPS may be evaluated for its bioactivity in a future study.

##plugins.themes.bootstrap3.article.details##

References
Aly AH, Debbab A, Kjer J, Proksch P. 2010. Fungal endophytes from higher plants: a prolific source of phytochemicals and other bioactive natural products. Fungal Divers. 41: 1-16.
Ates O. 2015. Systems biology of microbial exopolysaccharides production. Front Bioeng Biotechnol. 3: 200.
Chen Y, Mao W, Tao H, Zhu W, Qi X, Chen Y, Li H, Zhao C, Yang Y, Hou Y, Wang C, Li N. 2011. Structural characterization and antioxidant properties of an exopolysaccharide produced by the mangrove endophytic fungus Aspergillus sp. Y16. Bioresour Technol. 102: 8179-8184.
Costa OYA, Tupinamba DD, Belgmann JC, Barreto CC, Quirino BF. 2018. Fungal diversity in oil palm leaves showing symptoms of fatal yellowing disease. PLoS ONE. 13: e0191884.
Dong QL, Lin TY, Xing XY, Chen B, Han Y. 2014. Identification of a symbiotic fungus from blue-green alga and its extracellular polysaccharide. Lett Appl Microbiol. 58: 303-310.
Donot F, Fontana A, Baccou JC, Schorr-Galindo S. 2012. Microbial exopolysaccharides: Main examples of synthesis, excretion, genetics and extraction. Carbohydr Polym. 87: 951-952.
Edgar RC. 2004. MUSCLE: Multiple Sequence Alignment with high accuracy and high throughput. Nucleic Acids Res. 32: 1792-1797.
Elisashvili V. 2012. Submerged cultivation of medicinal mushrooms: bioprocesses and products (review). Int J Med Mushrooms. 14: 211-239.
Hao L, Xing X, Li Z, Zhang J, Sun J, Jia S, Qiao C, Wu T. 2010. Optimization of effect factors for mycelial growth and exopolysaccharide production by Schizophyllum commune. Appl Biochem Biotechnol. 160: 621-631.
Jeewon R, Liew ECY, Hyde KD. 2003. Molecular systematics of the Amphisphaeriaceae based on cladistic analyses of partial LSU rDNA gene sequences. Mycol Res. 107:1392-402.
Kavita K, Mishra A, Jha B. 2011. Isolation and physico-chemical characterisation of extracellular polymeric substances by the marine bacterium Vibrio parahaemolyticus. Biofouling. 27: 309-317.
Koski LB and Golding GB. 2001. The closest BLAST hit is often not the nearest neighbor. J Mol Evol. 52: 540-542.
Kumar S, Stecher G, Li M, Knyaz C, Tamura K. 2018. MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms. Mol Biol Evol. 35: 1547-1549.
Kusari S, Singh S, Jayabaskaran C. 2014. Biotechnological application of plant-associated endophytic fungi: Hope versus hype. Trends Biotechnol. 32: 297-303.
Liu J, Wang X, Pu H, Liu S, Kan J, Jin C. 2016. Recent advances in endophytic exopolysaccharides: Production, structural characterization, physiological role and biological activity. Carbohydr Polym. 157: 1113-1124.
Mahapatra S and Banerjee D. 2012. Structural elucidation and bioactivity of a novel exopolysaccharide from endophytic Fusarium solani SD5, Carbohydr Polym. 90: 683-689.
Mahapatra S and Banerjee D. 2016. Production and structural elucidation of exopolysaccharide from endophytic Pestalotiopsis sp. BC55. Int J Biol Macromol. 82: 182-191.
Manganyi MC and Ateba CN. 2020. Untapped potentials of endophytic fungi: A review of novel bioactive compounds with biological applications. Microorganisms. 8: 1934.
Mata JA, Bejar V, Llamas I, Arias S, Bressolier P, Tallon R, Urdaci MC, Quesada E. 2006. Exopolysaccharides produced by the recently described halophilic bacteria Halomonas ventosae and Halomonas anticariensis. Res Microbiol. 157: 827-835.
Maugeri TL, Gugliandolo C, Caccamo D, Panico A, Lama L, Gambacorta A, Nicolaus BA. 2002. Halophilic thermotolerant Bacillus isolated from a marine hot spring able to produce a new exopolysaccharide. Biotechnol Lett. 24: 515-519.
Maziero R, Cavazzoni V, Bononi VLR. 1999. Screening of basidiomycetes for the production of exopolysaccharide and biomass in submerged culture. Rev Microbiol. 30: 77-84.
Mishra A and Jha B. 2013. Microbial polysaccharides. In: Rosenberg E, DeLong EF, Thompson F, Lory S, Stackebrandt E.
Moscovici M. 2015. Present and future medical applications of microbial exopolysaccharides. Front Microbiol. 6: 1012.
Newman DJ and Cragg GM. 2015. Endophytic and epiphytic microbes as “sources” of bioactive agents. Front Chem. 3: 1-13.
Nisa H, Kamili AN, Nawchoo LA, Shafi S, Shameem N, Bandh SA. 2015. Fungal endophytes as prolific source of phytochemicals and other bioactive natural products: A review. Microb Pathog. 82: 50-59.
Nwodo UU, Green E, Okoh A. 2012. Bacterial exopolysaccharides: Functionality and prospects. Int J Mol Sci 13: 14002-14015.
Pinruan U, Rungjindamai N, Choeyklin R, Lumyong S, Hyde KD, Jones EBG. 2010. Occurrence and diversity of basidiomycetous endophytes from the oil palm, Elaeis guineensis in Thailand. Fungal Divers. 41: 71-88.
Prathyusha AMVN, Sheela GM, Bramhachari PV. 2018. Chemical characterization and antioxidant properties of exopolysaccharides from mangrove filamentous fungi Fusarium equiseti ANP2. Biotechnol Rep. 19: e00277.
Ruffing A and Chen RR. 2006. Metabolic engineering of microbes for oligosaccharide and polysaccharide synthesis. Microb Cell Factories. 5: 25.
Satpute SK, Banat IM, Dhakephalkar PK, Banpurkar AG, Chopade BA. 2010. Biosurfactants, emulsifiers and exopolysaccharides from marine microorganisms. Biotechnol Adv. 28: 436-450.
Selbmann L, Onofri S, Fenice M, Federici F, Petruccioli M. 2002. Production and structural characterization of the exopolysaccharide of the Antarctic fungus Phoma herbarum CCFEE 5080. Res Microbiol. 153: 585-592.
Strobel G, Ford E, Worapong J, Harper JK, Arif AM, Grant DM, Fung PC, Chau MW. 2002. Isopestacin, an isobenzofuranone from Pestalotiopsis microspora, possessing antifungal and antioxidant activities. Phytochemistry. 60: 179-183.
Suwannarach N, Sujarit K, Kumla J, Bussaban B, Lumyong S. 2013. First report of leaf spot disease on oil palm caused by Pestalotiopsis theae in Thailand. Disease Note. 79: 277-279.
Tamura K. 1992. Estimation of the number of nucleotide substitutions where they are strong transition-transversion G + C content biases. Mol Biol Evol. 9: 687-687.
Tan RX and Zou WX. 2001. Endophytes: A rich source of functional metabolites. Nat Prod Rep. 18: 448-459.
Torres-Mendoza D, Ortega HE, Cubilla-Rios L. 2020. Patents on endophytic fungi related to secondary metabolites and biotransformation applications. J Fungi. 6: 58.
Sajeewa SN, Maharachchikumbura, Guo LD, Chukeatirote E, Bahkali AH, Hyde KD. 2011. Pestalotiopsis – morphology, phylogeny, biochemistry, and diversity. Fungal Divers. 50: 167-187.
Yurnaliza, Aryantha INP, Esyanti RR, Susanto A. 2014. Antagonistic activity assessment of fungal endophytes from oil palm tissues against Ganoderma boninense Pat. Plant Pathol J. 13: 257-267.
Yurnaliza, Esyanti RR, Susanto A, Aryantha INP. 2017. The chitinase activity of oil palm (Elaeis guineensis Jacq.) roots against fungal endophytes and pathogenic Ganoderma boninense. Plant OMICS. 10: 247-251.
Yurnaliza and Jamilah I. 2018. Isolation and identification of exopolysaccharide-producing endophytic fungi from leaf midribs of oil palm. J Phys Conf Ser. 1116: 052080.
Yurnaliza Y, Rambe DI, Sarimunggu L, Purba M, Nurwahyuni I, Lenny S, Lutfia A, Hartanto A. 2020. Screening of Burkholderia spp. from oil palm plantation with antagonistic properties against Ganoderma boninense. Biodiversitas. 21: 3431-3437.
Zhang HW, Song YC, Tan RX. 2006. Biology and chemistry of endophytes. Nat Prod Rep. 23: 753-771.
Zhang H, Wang X, Li R, Sun X, Sun S, Li Q, Xu C. 2017. Preparation and bioactivity of exopolysaccharide from an endophytic fungus Chaetomium sp. of the medicinal plant Gynostemma pentaphylla. Pharmacogn Mag. 13: 477-482.
Zhbankov R.G. 1997. Fourier transform IR and Raman spectroscopy structure of carbohydrates. J Mol Struct. 436-437: 637-654.

Most read articles by the same author(s)

1 2 > >>